rs32862967 SNP Detail

Summary

• ID
  rs32862967
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3646271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCAAGTGC TGAATGTACA
  GGTGTTGCCT GCCACACCTA GCTGGTTCCC CCAGCCCCCC AGTAAGTTTA TTATAGTATG
  CATGTGAGGA GACTGCTTCC TCTGCTGCAT GTGTGGGGGT TAGCGGCTAA CACGGTGGAG
  TTGGGTTTTT CTTCCCACCT TCACGTGGGT TCTGGAGGCT GACCTTTGGG TTGTTACTTA
  W
  CAGCAAGCAC CTTTTCCCAC TTATCCATCC TCTGCCCCCC CCTTCATATT TTATTTGTGT
  GTGTGTTGAG GGGGCTATTC AGGCTACGGT GTATATATGA AGGTCAGAGG GTAACTTGTT
  GGGGTTGGTT CTTTCCTTCC ACTGTGTGGG TCTTGGAGAT GGAACTCAGG TTGTCTGGCT
  TTATGGCAAT GTTGAGCCAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46202411	mCV22853538	ABI	CRAMUS_MOUSE	f	SNP	T		A					A
ss61076730	NES16055164	PERLEGEN	MM_PANEL2	f	SNP	T		A	A	A	A	A		T	A	A	A	A	A	A	T	A
ss148546608	ENSMUSSNP3643528	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32862967					SNP	T	T	A	A	A	A	A	A	T	A	A	A	A	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61076730	NES16055164	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3646271 () rs orientation: forward

Symbol	Name	Function Class
Camsap3	calmodulin regulated spectrin-associated protein family, member 3	within coordinates
Rr180906	regulatory region 180906	71 bp distal
Rr381636	regulatory region 381636	1152 bp upstream
Tssr76064	transcription start site region 76064	249 bp upstream