rs32863501 SNP Detail

Summary

• ID
  rs32863501
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87155866 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT TAGTGTCTGC TACATAAATA
  Y
  GGCGAAAAGC TTGAGAATTG ACTGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss46739396	NES10739074	PERLEGEN	MM_PANEL2	f	SNP	T			T	C	T		T		C
ss135456733	ENSMUSSNP3013420	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T			T
ss320831821	CHEV_3_87052481	CHEVERUD	SCREENING_POP	f	SNP							T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs32863501					SNP	T	T	T	T	C	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46739396	NES10739074	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87155866 () rs orientation: forward

Symbol	Name	Function Class
Rr579465	regulatory region 579465	876 bp distal
Tssr33932	transcription start site region 33932	1100 bp downstream