rs32873753 SNP Detail

Summary

• ID
  rs32873753
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134071282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCC AGTGCCCCCT CCCCCGTCTC
  S
  GGCTGAGCGG TCTCCTGTCC TTCCT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45706700	mCV22575490	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C	C
ss147525967	ENSMUSSNP810370	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32873753					SNP	G	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134071282 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15035	CpG island 15035	183 bp distal
Rr601645	regulatory region 601645	252 bp distal
Rr601646	regulatory region 601646	836 bp proximal
Slc30a2	solute carrier family 30 (zinc transporter), member 2	within coordinates
Tssr39548	transcription start site region 39548	817 bp downstream
Tssr39549	transcription start site region 39549	760 bp downstream
Tssr39550	transcription start site region 39550	465 bp downstream
Tssr39551	transcription start site region 39551	436 bp downstream
Tssr39552	transcription start site region 39552	363 bp downstream
Tssr39553	transcription start site region 39553	291 bp downstream
Tssr39554	transcription start site region 39554	267 bp downstream
Tssr39555	transcription start site region 39555	62 bp downstream
Tssr39556	transcription start site region 39556	31 bp upstream