rs32874799 SNP Detail

Summary

• ID
  rs32874799
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3647660 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATGGCAAA GCCAATGTTT
  AGGGAGAGAT TCTGTCTCAA AACCTCAGTG GATGTGCTCA GCTGTCGAGA GCTCTGCCTA
  CTCTCCTAGA GAACACAGCC ATATTTCCCA GAACCCATGT CTGGTGGCTC ACAACTATCT
  GTAACTTTAG CTTCTGGAGG TCTGACTGGT ACCCACCCTC TTCTGGCCTC TGAGGGCACT
  Y
  GTATGGCACA TGTGTGTGCA CATGCGCGTA CACACACACA CACAGCCCTG GCTTGTACCT
  ATATGCCTGA CTCTGTAGTT CCTAGTCCAG ACCATTCCTT CTTTTCGATC ATGTACTTTG
  TAGAAGAGTG AGCAGATGGG TTATGTGTTG ATCTGACCTG CTGTGCCCCT CCCCAATGCA
  GAGCATGTGC CTCCGGAGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46204013	mCV22853514	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss148546649	ENSMUSSNP4598071	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32874799					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3647660 () rs orientation: forward

Symbol	Name	Function Class
Camsap3	calmodulin regulated spectrin-associated protein family, member 3	within coordinates
Rr180906	regulatory region 180906	1460 bp distal
Rr189485	regulatory region 189485	741 bp proximal
Rr381636	regulatory region 381636	within coordinates
Tssr76064	transcription start site region 76064	1136 bp downstream
Tssr76065	transcription start site region 76065	655 bp upstream
Tssr76066	transcription start site region 76066	679 bp upstream
Tssr76067	transcription start site region 76067	694 bp upstream
Tssr76068	transcription start site region 76068	711 bp upstream
Tssr76069	transcription start site region 76069	783 bp upstream
Tssr76070	transcription start site region 76070	933 bp upstream
Tssr76071	transcription start site region 76071	982 bp upstream
Tssr76072	transcription start site region 76072	1861 bp upstream