rs32876099 SNP Detail

Summary

• ID
  rs32876099
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185867842 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAGAGAGA GAGAGAGGAG
  TTACAGAGGT TGCAACAAGA CAGCAGCAGA TAAAAATCTT TGAAGACTTA AGAAAGGAGG
  AGAGAGCCAA GGAGGGAAGG ACTTCCCCTG ATGCTGCTTG TTTGTGTTGT GGGAAAGAAT
  GTCTCATAGG AAGTCACAGG ATGTGAAAAG CACACAGAGT TTTGTCATGT TTTCCTTTAC
  Y
  AACCTGACAT GTAGAAAAGC CTTAGGCTGT GGAGCAAGGA TCAGTAGCTG ACTTTTATAA
  GGGCATGGAG AAGACAGGGG TTGGTCCTTT GGAGTAGTGG CCTCTGGTGA GCGGATTCTG
  TAAGCAATGG CTGTGCTCCA GTTGAACACT TTCAAGAGAT GATAATTGGT AAAGACCATT
  TAATCACACC TTGCCTTTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	NOD/ShiLtJ
ss46740961	NES10650006	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	NOD/ShiLtJ
rs32876099					SNP	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46740961	NES10650006	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185867842 () rs orientation: forward

Symbol	Name	Function Class
Rr425453	regulatory region 425453	1108 bp proximal