rs32876193 SNP Detail

Summary

• ID
  rs32876193
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87996056 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCGGGCTGA GTGCCTGGGA
  CCTGATTTCC CTACAGGAGA CTATAGCCTG CATCCTGTAG CTCCAGAGGT CCCATCTAGT
  GGTCAGCTGA CCCTGAACAC TCTGTGACTA TGTAACTGGC TGCGTCTTGG CTTACTTAGT
  AAGCCTTTTT GACATCTGAC TAAATGGGAA TGGTTATAGG AACTGACTTA GAAGCCTGGG
  Y
  TGCAGGCACT CCCAGCTCTG GTTGGAGAGG GATGCATTGT TCAACATGAT CCTCCCTCCC
  TAGGCCAGCT TGGAAGCTGT ATTGCACAGC CCTCCTTGGT GCCGCTCTTC CCAATGTGCA
  GCAATTGTCT GGTTTCTCCT CTAGATCTTC CTCCCAGAGA CCACAGACAT CTATGACAAA
  AAGAACATGC CTCGGGTGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46741232	NES10740537	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32876193					SNP	T	T	T	T	T	C	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46741232	NES10740537	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87996056 () rs orientation: forward

Symbol	Name	Function Class
D3Mit210	DNA segment, Chr 3, Massachusetts Institute of Technology 210	312 bp proximal
Iqgap3	IQ motif containing GTPase activating protein 3	within coordinates
Rr68755	regulatory region 68755	656 bp distal
Rr81852	regulatory region 81852	945 bp proximal
Rr83308	regulatory region 83308	795 bp distal