rs32877387 SNP Detail

Summary

• ID
  rs32877387
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:68950602 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGATAAAC TGGAACAACT
  TTGAAATAGG AACATAACAC ATGACTTACA CTGAATCATA AATGATAAAC CCACAGCAAC
  ATGCAATATT TGCAGAATTT GACATCCACA TTACACTCAT GACTATTTTT TACTTACATT
  AAATTTAAAA AACAAAATCA TCAATATAAC ATTATTGGTT TCATAGTGAT TCTGGGTTAA
  S
  AAATCTTTGT AAGAACTCTA AAGAATGTGA CGTTTCCTAT TATAGTTATC ACTTATAGAA
  CTTTTTGGAG TTATTCAATA CCATGGCATG CCTGAAGAGG AACCACAATT CTTCGGTTCT
  CCAAGTAATC TGTGTTAATT TAGCAGTTCA TACAAAATGT TGTTCATGGG TTTAGTGAAA
  ATCCAATGAT CATATTTTAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ
ss49412774	NES12787174	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	G	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ
rs32877387					SNP	C	C	C	C	G	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49412774	NES12787174	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:68950602 () rs orientation: forward

Symbol	Name	Function Class
Erbb4	erb-b2 receptor tyrosine kinase 4	within coordinates
Tssr12045	transcription start site region 12045	538 bp upstream