rs32877391 SNP Detail

Summary

• ID
  rs32877391
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:68948147 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTATAT ATATGTGTGT
  ATATATGACA ATGAAATAAA AGGAGGCCAT GAAATTGAAA CAAACAGGGA ACTGCTTATG
  GAAGTATTGG GAAAAAGAAA GAGAAGAAGA AATGTGATAT AATTATATTG TAATCTCAAA
  AGTGGGTATT ACAGTTGAGA AGTAGAGAGG TGGAGACAGT AGGATGCCTG AGGGCCAACA
  W
  AATCAGTAAA CCCGGGGTCT CAGTGAAAGA AACACTGGTT AAAAACAAAT AAAATAACAA
  AAACAATAAA AACTTCAAAA ACCAAAGTGG ATAGTTGGTG TGAATCAACA TCCAGTACTG
  ACCTTTGCCC TCCATACACG TACACAAATA TAGATAGATA GATAAATAGA TAGATAGATA
  GATAGATAGA TAGATAGATA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss49412780	NES12787269	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs32877391					SNP	T	T	T	T	T	T	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49412780	NES12787269	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:68948147 () rs orientation: forward

Symbol	Name	Function Class
Erbb4	erb-b2 receptor tyrosine kinase 4	within coordinates
Tssr12045	transcription start site region 12045	1914 bp downstream