rs32877707 SNP Detail

Summary

• ID
  rs32877707
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:80004774 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTAAAGCTA TGTTCTTTCT
  TATTCTTTGA AAATGTAATA CTTGTATACA ATATATTTCA ATTATAGCTA TTTCCCTTCT
  TTTCCAACTT CCTCTAGACC CTACTCAACA CATGTCTCCT AAATTCATGT GTTACTGAGT
  ACATCCAGTG GTGCCTATAT GCACATAGGT ACGGACAACA TACCAAAGAC CAGATCTACA
  W
  AGAAAACTGA CACTCCTTCC CATAGCCGTC AGGATCCCCT TCCCCATCCA TACTTAACCA
  CACACTGAGT TCAAGAGTGC CATAAGTGTG TTACACCCAG AAGACAGCAT TTCACAGAAC
  TCCAACTCCC ATCCTCTGTC TCTTACACTG TTTCCATCAC CTTCTTCCAA GGTGTTCACT
  GAGCTGAGGG GAAGGAGGAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45206454	mCV25098021	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	A	A
ss146790329	ENSMUSSNP3090861	ENSEMBL	ENSEMBL_Sanger	f	SNP			A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32877707					SNP	T	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:80004774 () rs orientation: forward

Symbol	Name	Function Class
D2Mit94	DNA segment, Chr 2, Massachusetts Institute of Technology 94	1180 bp proximal
Gm75126	predicted gene, 75126	within coordinates