rs32877727 SNP Detail

Summary

• ID
  rs32877727
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185914777 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCTAGAGG TTTGTCCTCT
  CTCTGTCCTG TGTTCTGCTT AGCATTTCTT TGGCTCTTTC TGAATCAGTG AATGATATCT
  GCCTTTACAG TAGAGAGAAA TTTGTCATTT TGAGATTGGT AATATGTCAG CGACTCCATG
  CCCTACCTAC AGCACACGCT AGCTGCAGGG ACTGTGGGAG CAGGCACCGT GCCTATCTCC
  R
  TGTCTACAGG AGTAGACAAC AACGTCCTCC CTAACTCCTG ACCCCTGCAA AGGGCTTCCC
  CGAGATGAGA GCTGCGCTAC ACAGTTATTT ATGAGACGTT AACCTTCGAT CATTTCCAAG
  GCACAACAAA GCCTTCTTCT CTGGGTTACT TATTTATTTA TGCCAGCATT ACAGTACTTC
  ATTATTGCCA CAGGGGGAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46741651	NES10647401	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32877727					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46741651	NES10647401	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185914777 () rs orientation: forward

Symbol	Name	Function Class
Gm37134	predicted gene, 37134	within coordinates
Gm37272	predicted gene, 37272	within coordinates
Rr425457	regulatory region 425457	within coordinates