rs32878276 SNP Detail

Summary

• ID
  rs32878276
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84466195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGA GCCAAGGGAC TCCTGCTTAG
  R
  GAATCCAGAA GTGGGGGTAG GGCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46204156	mCV23004479	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss145361120	ENSMUSSNP3258347	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32878276					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84466195 () rs orientation: forward

Symbol	Name	Function Class
Adgre5	adhesion G protein-coupled receptor E5	within coordinates
Cpgi20655	CpG island 20655	1312 bp proximal
Gm46046	predicted gene, 46046	1720 bp upstream
Rr368559	regulatory region 368559	371 bp upstream
Rr666301	regulatory region 666301	1593 bp proximal
Rr666302	regulatory region 666302	1750 bp proximal
Rr666303	regulatory region 666303	1804 bp proximal
Tssr2618	transcription start site region 2618	540 bp downstream
Tssr2619	transcription start site region 2619	824 bp upstream
Tssr2620	transcription start site region 2620	1710 bp upstream
Tssr78289	transcription start site region 78289	1145 bp downstream
Tssr78290	transcription start site region 78290	1117 bp downstream
Tssr78291	transcription start site region 78291	771 bp upstream
Tssr78292	transcription start site region 78292	797 bp upstream
Tssr78293	transcription start site region 78293	915 bp upstream
Tssr78294	transcription start site region 78294	998 bp upstream
Tssr78295	transcription start site region 78295	1049 bp upstream
Tssr78296	transcription start site region 78296	1069 bp upstream
Tssr78297	transcription start site region 78297	1822 bp upstream
Tssr82049	transcription start site region 82049	495 bp downstream
Tssr82050	transcription start site region 82050	580 bp downstream
Tssr82051	transcription start site region 82051	861 bp downstream
Tssr82052	transcription start site region 82052	1607 bp downstream