rs32879148 SNP Detail

Summary

• ID
  rs32879148
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185916645 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTACGTAG AGAGCCAGGG
  CCAGTCTCTA AGGATGGGAA CAAAACTGTT CCCATGTTTC AGTGTTATAA TTTGAACATC
  TGTATATAAC TTTAGTCCCA GAGAGTCCCC TGACACTGTC TTCTATATCA AAAACGGCCA
  GACACAAAAA GGAAATATAT GTGATGTGTG TGTGTCTGCA CGTGCGTGTG TGTCTTTAAA
  R
  CACAAACCAA AGAGTAATAA CAACTGTTTG ATTCTCCTCA TGACTCTATT TTCCTCACAC
  AGATGCAAAC CTTGAGCATA AATATTTGCA ATATTATAAC ACATGGGGAT ATGGAAGCCA
  TCTTATTTAG ACATCATTTC TCCCTGGAAA TACTATTCTG GTTTGTCAGG AGTTTTCGTT
  CATGTGTGTT TTCATTTAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46741672	NES10647299	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32879148					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46741672	NES10647299	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185916645 () rs orientation: forward

Symbol	Name	Function Class
Gm37134	predicted gene, 37134	within coordinates
Gm37272	predicted gene, 37272	1704 bp downstream
Rr425457	regulatory region 425457	1190 bp distal