rs32880097 SNP Detail

Summary

• ID
  rs32880097
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36971444 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTAAGTTA CCTAGCACAC
  TCAAGTCCAA CCTAGACAAC CTAGGGAGAC CCTGACACAG TCAAAATACA AGTTAAAAAG
  AGCCAGGGTA CAGCTGAGTA ACAGGGCACT TACACAGCAC CACCACGGCT ATGGGTTCAA
  TCCCTAGTAC TGAGGAAAGC AAGGAGAAAC TGTGGCTGCC TGCCTAGGGG TCCAGCACTA
  S
  AGTCTCCAAA GGAGGTCCTA AGTCTGAGGC CAGCCTGGCC CACACAGGGA GAAATGGAAA
  TTCCCACACA TGCTACAACA CAAGCTTCAC AGACATTATG CCAAACAAAA TAAAACAAGC
  CAAAAAGACA GTGCTGTGGG AGTCCACTTA TATGTTATGC AGCTCTCATC AAATTCAGAC
  ACTGTGGCCA GGATGGGGTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47226191	NES11102547	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	G	C	C	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32880097					SNP	C	C	C	C	C	C	G	C	C	C	G	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47226191	NES11102547	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36971444 () rs orientation: forward

Symbol	Name	Function Class
Tmem131	transmembrane protein 131	within coordinates
Tssr11283	transcription start site region 11283	298 bp upstream