rs32880103 SNP Detail

Summary

• ID
  rs32880103
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36971878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    catgcaaat aaacttaatg tacctgaact
  gaatgcctaa aacgattaat ataaattttg tgGGATTTCA TTACAAAAAG ACATACAAAC
  AATGCAAGCT TTACACTCTT ATCATGACAG AACATGTCAA GGGTCCTCTT AGATCTTAGA
  Y
  ATTTTTCAAA CCTTTGTCCC ATGTATGGTA GCAAGCTGAA TGAAGCAAAG TGAAGCTAAG
  AAAAATgggc gtggtggcgc acacctttga tcccagcact gggggggggg ggcaggcaga
  tttctgagtt cgaggccagc ctggtctaca                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47226197	NES11102501	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T	C	C	C		C	T	T	C		C
ss319690051	CHEV_1_36989642	CHEVERUD	SCREENING_POP	f	SNP									T					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32880103					SNP	C	C	C	C	T	C	C	C	T	C	T	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47226197	NES11102501	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36971878 () rs orientation: forward

Symbol	Name	Function Class
Tmem131	transmembrane protein 131	within coordinates
Tssr11283	transcription start site region 11283	732 bp upstream