rs32885749 SNP Detail

Summary

• ID
  rs32885749
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185913423 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGCGTCC CTGTCCCATC
  AAATCAGACA TAATCTTAGT TTACTTAAAG AGACCCTGAA GCTGGTAGCT CACTTTACAG
  ATGGCACGCT GTGCTGTGGA AGAGAAGTCT CCCCACAGGT AGGAACCTAG AACCAGTGGA
  AATTGTTAAA ATGCTACTTT AAAGTAAACT CTACTATTGA GACATTTGAA AAAGACACTA
  W
  GCCAGTGTTG AATCAGGCTC GGCCCCACTC CAGTCACCCC ATGTTGTGCA AAACAGTGGT
  CCGTGCCCTG CCTTGAGAGA GACTGTTTCA CCTGCAGCTT TTGAATCCAG ACTGAAGATG
  AAGGATGATT GCGCACTTCA GTGTACATAC AAATGGCTCG CTCTGTCAGC CAATGAGGCA
  CAGGCTGATG AATGATTGGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46741621	NES10647391	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	T	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32885749					SNP	A	A	A	A	A	A	T	A	A	A	T	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46741621	NES10647391	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185913423 () rs orientation: forward

Symbol	Name	Function Class
Gm37134	predicted gene, 37134	within coordinates
Gm37272	predicted gene, 37272	1031 bp upstream
Rr425457	regulatory region 425457	1249 bp proximal