rs32885997 SNP Detail

Summary

• ID
  rs32885997
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11260277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGAGTTCC TAATCTCTGT
  TTTCTACTGA TGTTTCCATT CATCTGACAT CCCTCCAATC CCACGTGTTT GGTAGCTTCT
  GCATCTGCCC AGAACATTGA TAAAGCCTGG TGCATTAACA ATTCACCTGC CAGAGACTGC
  CCTACCTGGG AATCCATCCC ATATACAGTC AACAATCCCA GACACTATTG TGGATGCCAA
  Y
  AAGTGCTTGC TGACAGGGCC TGATATAGCT CTGTCACTGC CTGACAAATA CAGAGGTAGA
  TGCTCACAGC CAACCATTGG ACTGAGCAGA AGGTCCCCAA TGGAGGAGAT AGAGAAAGGA
  CTGAAGAAGC TGAAGGAGCT TGCAGTCCCA TAGGAGGAAC AACAATATGA ACCAACCAGT
  ACCCCCCGCC CAGAGCTCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46205489	mCV23752791	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss148666883	ENSMUSSNP720531	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32885997					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11260277 () rs orientation: forward

Symbol	Name	Function Class
Col4a1	collagen, type IV, alpha 1	within coordinates
Tssr80369	transcription start site region 80369	1296 bp downstream