rs32886156 SNP Detail

Summary

• ID
  rs32886156
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152733032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGTT TTAGCTGTGC AGTGGCGGGC
  Y
  GTGTGCTGTG GTGGGCCGTG TGCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
ss46742565	NES11009084	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	T	T	T	C	T	T	T		C	T	C
ss321435534	CHEV_4_152022684	CHEVERUD	SCREENING_POP	f	SNP											T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
rs32886156					SNP	C	T	T	T	T	T	C	T	T	T	T	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46742565	NES11009084	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152733032 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15417	CpG island 15417	1339 bp distal
Gm69406	predicted gene, 69406	within coordinates
Gm69411	predicted gene, 69411	1921 bp upstream
Rr87959	regulatory region 87959	432 bp distal
Rr93365	regulatory region 93365	1032 bp distal
Rr97434	regulatory region 97434	383 bp distal
Rr103964	regulatory region 103964	1970 bp proximal