rs32887551 SNP Detail

Summary

• ID
  rs32887551
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84930477 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATTT GAGGATCAGG GTTGGGGACG
  R
  CCGGAGGGCC TCTGCCCTGG TTCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46205151	mCV24182486	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss145374909	ENSMUSSNP1973584	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss322748106	CHEV_8_86727747	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32887551					SNP	G	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84930477 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20683	CpG island 20683	1994 bp distal
Cpgi20684	CpG island 20684	15 bp distal
Gm37352	predicted gene, 37352	799 bp downstream
Gm56841	predicted gene, 56841	within coordinates
Gm65345	predicted gene, 65345	512 bp downstream
Rr178128	regulatory region 178128	724 bp proximal
Rr186983	regulatory region 186983	within coordinates
Tssr78376	transcription start site region 78376	440 bp upstream
Tssr78377	transcription start site region 78377	1381 bp upstream
Tssr82085	transcription start site region 82085	1878 bp upstream
Tssr82086	transcription start site region 82086	1856 bp upstream
Tssr82087	transcription start site region 82087	1831 bp upstream
Tssr82088	transcription start site region 82088	353 bp upstream
Tssr82089	transcription start site region 82089	321 bp upstream
Tssr82090	transcription start site region 82090	177 bp upstream
Tssr82091	transcription start site region 82091	261 bp downstream