rs32887570 SNP Detail

Summary

• ID
  rs32887570
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:85435903 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACC CACCCTGACC GGTCGTGGGC
  S
  TTTTGGGCAC CAGACTGGGG AAGGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46205434	mCV24193657	ABI	CRAMUS_MOUSE	f	SNP	C	G	C	G
ss145392407	ENSMUSSNP1590339	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G		G
ss322751415	CHEV_8_87233173	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32887570					SNP	C	G	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:85435903 () rs orientation: forward

Symbol	Name	Function Class
Nfix	nuclear factor I/X	Intron
Rr666589	regulatory region 666589	67 bp proximal
Tssr78440	transcription start site region 78440	629 bp downstream
Tssr82127	transcription start site region 82127	758 bp upstream