rs32887570 SNP Detail

Summary

• ID
  rs32887570
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:85435903 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACC CACCCTGACC GGTCGTGGGC
  S
  TTTTGGGCAC CAGACTGGGG AAGGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46205434	mCV24193657	ABI	CRAMUS_MOUSE	f	SNP	C	G	C	G
ss145392407	ENSMUSSNP1590339	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G		G
ss322751415	CHEV_8_87233173	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32887570					SNP	C	G	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:85435903 () rs orientation: forward

Symbol	Name	Function Class
Nfix	nuclear factor I/X	within coordinates
Rr178192	regulatory region 178192	within coordinates
Rr178193	regulatory region 178193	1898 bp proximal
Rr187001	regulatory region 187001	702 bp distal
Rr187002	regulatory region 187002	302 bp distal
Tssr78440	transcription start site region 78440	629 bp downstream
Tssr82127	transcription start site region 82127	758 bp upstream