rs32889795 SNP Detail

Summary

• ID
  rs32889795
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:93285933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAAA TATGTTCCTT TTATAACATT
  R
  TGTGTGAGTG TGCTCCCTTT TCAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45208514	mCV23858099	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss146943837	ENSMUSSNP1847050	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss320395946	CHEV_2_93295745	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32889795					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:93285933 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cd82	CD82 antigen			Intron
				Noncoding-Transcript-Variant
Gm10804	predicted gene 10804			within coordinates
Rr561203	regulatory region 561203			604 bp distal
Rr561204	regulatory region 561204			570 bp distal
Rr561205	regulatory region 561205			1891 bp proximal
Tssr18995	transcription start site region 18995			910 bp downstream