rs32892595 SNP Detail

Summary

• ID
  rs32892595
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152353493 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCGCAGCTCA GAGTGTGGGG
  GAGAGTCTTG CCTTCTGGAG ACTCATCTCA GCGGACTCCC CAGATATTTG GATGCTCGTG
  ACAGAAGAAT ATCAGAGAGC AGGGGCAGGG GCTGCCAGAA GATCCCACTT TCCTTCCAAC
  TGATCCAAGT TGAAATGATG CTTCTCACCA CCACCAAGGA TGGCAGGGTG GGGGTGAGGG
  R
  ATAGGCTCTG TTCAACAACT CACCCAAACC CCACCATTCC CATTTTAGAA GGTCCCATTA
  CCTTTGTTCC CCTGAGTTAG CAACCCATGG ACAATGAAGG CCAGTGTTAG GAAAATCATG
  GCTTCAGAGA GAGAATGATC TATGTCCGGA GGAAGTCAGA TTGCTTTATC CAGCAGGTGA
  TCTAGGTCTT TAGCTTTATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45208460	mCV23534168	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss147966711	ENSMUSSNP4875814	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs32892595					SNP	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152353493 () rs orientation: forward

Symbol	Name	Function Class
Defb26	defensin beta 26	within coordinates
Tssr26832	transcription start site region 26832	133 bp downstream
Tssr26833	transcription start site region 26833	158 bp downstream
Tssr26834	transcription start site region 26834	203 bp downstream
Tssr26835	transcription start site region 26835	220 bp downstream