rs32894075 SNP Detail

Summary

• ID
  rs32894075
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132458082 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCTT GAATCCAGAC CAGCTGCCTA
  W
  CACTCAGGCA CCCTCTTTTT TTTTT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45709331	mCV24227733	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
ss147477603	ENSMUSSNP3225960	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321335950	CHEV_4_132286686	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32894075					SNP	A	A	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132458082 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14969	CpG island 14969	1430 bp proximal
Rr398540	regulatory region 398540	1786 bp upstream
Rr601049	regulatory region 601049	1663 bp proximal
Rr601050	regulatory region 601050	1748 bp proximal
Rr601051	regulatory region 601051	1765 bp proximal
Tssr39417	transcription start site region 39417	1055 bp upstream
Tssr43695	transcription start site region 43695	939 bp downstream
Tssr43696	transcription start site region 43696	1656 bp downstream
Tssr43697	transcription start site region 43697	1743 bp downstream
Tssr43698	transcription start site region 43698	1794 bp downstream
Xkr8	X-linked Kx blood group related 8	within coordinates