rs32896273 SNP Detail

Summary

• ID
  rs32896273
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:63071522 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGG TCCCTACACA GACAATTTTA
  Y
  GATTCAGGAC AAAGCTGGGG TTGCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45709833	mCV22655768	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss146440173	ENSMUSSNP199386	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32896273					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:63071522 () rs orientation: forward

Symbol	Name	Function Class
Ambp	alpha 1 microglobulin/bikunin precursor	Intron
Rr593477	regulatory region 593477	1945 bp distal
Rr593478	regulatory region 593478	878 bp proximal
Tssr37529	transcription start site region 37529	1802 bp downstream
Tssr37530	transcription start site region 37530	693 bp downstream
Tssr37531	transcription start site region 37531	632 bp downstream
Tssr42025	transcription start site region 42025	657 bp upstream
Tssr42026	transcription start site region 42026	615 bp upstream
Tssr42027	transcription start site region 42027	599 bp upstream
Tssr42028	transcription start site region 42028	579 bp upstream
Tssr42029	transcription start site region 42029	845 bp downstream
Tssr42030	transcription start site region 42030	995 bp downstream
Tssr42031	transcription start site region 42031	1505 bp downstream
Tssr42032	transcription start site region 42032	1552 bp downstream