rs32897128 SNP Detail

Summary

• ID
  rs32897128
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27751454 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCCTCGCGC CGCTCCCACC CACTTTTGCG CTTCTCCCCT
  CCCCGGTCTC CTCCCCCAAC TACTCCTCTT ACAACTCAAA AACAAGAGGA ATCCTGGCGC
  R
  GTGATGAACC TTGGGCTACT GCTGGCGCAG CCGGGCCACA TGCCTATTTT CTCGGGCAGC
  TGTCCCTGCA CCAGGGAGCA CAGCCAGATC CCAGAACCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46207036	mCV24519073	ABI	CRAMUS_MOUSE	f	SNP	G	G	G			G		A
ss51947118	NES14964418	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G		G	A	G	G	G	G	G	G
ss148886545	ENSMUSSNP2310886	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32897128					SNP	G	G	G	G	G	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51947118	NES14964418	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27751454 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20220	CpG island 20220	within coordinates
Eif4ebp1	eukaryotic translation initiation factor 4E binding protein 1	within coordinates
Rr186444	regulatory region 186444	within coordinates
Rr186445	regulatory region 186445	1746 bp proximal
Tssr76776	transcription start site region 76776	1094 bp downstream
Tssr76777	transcription start site region 76777	1056 bp downstream
Tssr76778	transcription start site region 76778	1008 bp downstream
Tssr76779	transcription start site region 76779	964 bp downstream
Tssr76780	transcription start site region 76780	917 bp downstream
Tssr76781	transcription start site region 76781	within coordinates
Tssr76782	transcription start site region 76782	1320 bp upstream