rs32897762 SNP Detail

Summary

• ID
  rs32897762
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:88627145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGGCACCA CTGATAGTCT
  TTTATGTTAG CATGGTAGCT AACATGCAGT AGAGTGAAGT TTAATGGTCG TCATACAGTT
  TGAGATGTGA GCTGCAAAAA CAGTAACAAA CTTGGACATA TCTATGGATT TGCCACTGAA
  GAAGCCCATG CACCCTGGGA CTTACTGTAA TGGGAAAGTG AGGGCTCTGC GGCTGAGGAG
  Y
  ATGTACCAAC CGATAACTCT TGAATAAGGA TCTCACTCTG CTCAGGTCTC TCTTCACTGC
  AATCTGTTTA GATAACCTAA CTATGACTTA GCATCTGTGG TAATGATGCT TGCCCCAATA
  GCCTGGTGAC CTGAATTTAT GCAAAACCAA TGGAAAGATG GAAGGAGAGA CTGGACTCTA
  CAATGTTGTT TTCTTGGTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46744730	NES10759383	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32897762					SNP	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46744730	NES10759383	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:88627145 () rs orientation: forward

Symbol	Name	Function Class
Rit1	Ras-like without CAAX 1	within coordinates
Rr579876	regulatory region 579876	1708 bp distal
Rr579877	regulatory region 579877	116 bp distal
Rr579878	regulatory region 579878	639 bp distal