rs32899125 SNP Detail

Summary

• ID
  rs32899125
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129228482 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAT CAAGTTAGCG AACGTAAACG
  R
  AAAGGGCACA AACCTCTCCA AGCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45710216	mCV22717102	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss147438515	ENSMUSSNP4821153	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss321312036	CHEV_4_129011933	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32899125					SNP	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129228482 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14889	CpG island 14889	within coordinates
Rbbp4	retinoblastoma binding protein 4, chromatin remodeling factor	within coordinates
Rr367701	regulatory region 367701	670 bp upstream
Rr367702	regulatory region 367702	1118 bp upstream
Rr600200	regulatory region 600200	632 bp proximal
Rr600201	regulatory region 600201	671 bp proximal
Tssr39141	transcription start site region 39141	904 bp upstream
Tssr39142	transcription start site region 39142	1273 bp upstream
Tssr39143	transcription start site region 39143	1327 bp upstream
Tssr43492	transcription start site region 43492	554 bp downstream
Tssr43493	transcription start site region 43493	608 bp downstream
Tssr43494	transcription start site region 43494	635 bp downstream
Zbtb8os	zinc finger and BTB domain containing 8 opposite strand	843 bp upstream