rs32900342 SNP Detail

Summary

• ID
  rs32900342
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:124501833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGCT GTTGCTTAGT TGGCAGAGTG
  Y
  TTGCCTAGGA TGCATGAAAC CCTAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45710065	mCV22615925	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	T
ss147388884	ENSMUSSNP4596532	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		T
ss321294261	CHEV_4_124285283	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32900342					SNP	C	C	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:124501833 () rs orientation: forward

Symbol	Name	Function Class
3100002H09Rik	RIKEN cDNA 3100002H09 gene	1891 bp downstream
Gm2164	predicted gene 2164	within coordinates
Gm70190	predicted gene, 70190	971 bp downstream
Rr599298	regulatory region 599298	1494 bp distal
Rr599299	regulatory region 599299	309 bp distal