rs32901582 SNP Detail

Summary

• ID
  rs32901582
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:40057449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGGCTCAG GTTCTGTCCT
  GCATAGCCCA AGCTTGTTTT ATTAGTTTGA CATTTGGCCT CTGGTTTAGC TGCTTCTCTT
  CCTTACACAA TCTTCTTCTT TGCTGAGACA AACTCACTGA CTTATGTTCT GGGCACACGT
  GCATTGTTCC ATATAACATA GAAATCTTGT CTTATTTAAA AATTTTTTAA ATTTAAATTA
  M
  ATACATATGG CTCTTGGCAT TTTTATATTC TTTCAGTCCT GATATGATTA GAGATTTACC
  AGGTCTGCAT AAAATTTACA ATGAACAGCT GTTCTGTTAA AAAAAAATAA AAAGACTGCT
  ATGAACTATT CTTAAGACTT TAAAGGTCTT CATGGTTTTA CAGACATCTT CACACATATT
  TTGGTCCCCA CAACAACCCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46207366	mCV24622201	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32901582					SNP	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:40057449 () rs orientation: forward

Symbol	Name	Function Class
Msr1	macrophage scavenger receptor 1	within coordinates
Tssr2550	transcription start site region 2550	1059 bp downstream
Tssr80996	transcription start site region 80996	129 bp downstream
Tssr80997	transcription start site region 80997	178 bp downstream
Tssr80998	transcription start site region 80998	552 bp downstream
Tssr80999	transcription start site region 80999	616 bp downstream
Tssr81000	transcription start site region 81000	811 bp downstream
Tssr81001	transcription start site region 81001	867 bp downstream
Tssr81002	transcription start site region 81002	881 bp downstream
Tssr81003	transcription start site region 81003	903 bp downstream
Tssr81004	transcription start site region 81004	963 bp downstream
Tssr81005	transcription start site region 81005	984 bp downstream
Tssr81006	transcription start site region 81006	1021 bp downstream
Tssr81007	transcription start site region 81007	1086 bp downstream
Tssr81008	transcription start site region 81008	1196 bp downstream
Tssr81009	transcription start site region 81009	1212 bp downstream
Tssr81010	transcription start site region 81010	1239 bp downstream
Tssr81011	transcription start site region 81011	1317 bp downstream
Tssr81012	transcription start site region 81012	1342 bp downstream
Tssr81013	transcription start site region 81013	1510 bp downstream
Tssr81014	transcription start site region 81014	1537 bp downstream