rs32901583 SNP Detail

Summary

• ID
  rs32901583
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:96287657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCAGTATG CAGCCAGTAA
  AGAATGAGCT ATGATCATTA ACTACGTAAG GGGTTGTAGG GGCTGTAATT TTTCGGTAGG
  GAGTTGTGGA AATGGGGAAA CATCTCAAGA TAACTACCAG GTTTCATTTA TCCCACCTGT
  CCTACCTGAG GACACTTCTG CAAGTGTCAA ATCTCTGCTC CCACCCCATG GTCCATCTTG
  K
  TCCGACATAA AGGAAGGACT ATGCACCCTC CTTAATTTAT GACCTCCTTG ACTGGAAGAG
  CCAGGCAGGC TGGCCAATGA TATGTTGCTC TCGCTGTTTG GACTGAGGCA ACCAGTAAGC
  AGGGGGCCAA TGGATAACAG CGAACAGTTT GGAAAGACTC AAGGAGGAGA TGCAAAGAGG
  CAAAGGGTGA CCTCTTAGCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46207367	mCV23402358	ABI	CRAMUS_MOUSE	f	SNP	G	G	T					G		G
ss60650944	NES16266195	PERLEGEN	MM_PANEL2	f	SNP	G		T	T	G	G	G		G		G	G	G	G	T	G	G
ss145644686	ENSMUSSNP3599051	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T							G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32901583					SNP	G	G	T	T	G	G	G	G	G	G	G	G	G	G	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60650944	NES16266195	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:96287657 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Prss54	serine protease 54			Intron
				Noncoding-Transcript-Variant