rs32902406 SNP Detail

Summary

• ID
  rs32902406
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:115873422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGAGACTG AAGGGCAATT
  ATTTTAGACA AAATCGGGGA GGTGCAATGC AGGAAGACCC AGCCTTCTCC CAGCCGCCCA
  GCCAAATGGA TTCCTTATGG CTAGAAGTCA TCCTTCCCGT AGGCAGGAAC TGTGGGCAGA
  CTCCCGCGCC TGCTCACCCA AGCTGTGCTG AAAGCTGGCT GCACAGAAGG ACATGGAGGA
  R
  CAGCCAAGGC TCCCCAGGCC TAGCCCAGAA TCAGCATGAG GATCCTGAGA TGGTACCACC
  AAGGAATAAC CAAAGAACCT GTGCTCGCTC AGGTAGAGGT GGCAGGTATG GGATCCGAGC
  CTCCCAAACT AGGAGGTGCC AGCTCCAAAC ACTGCCTGGG TAGGCTGGAA CCAAGGGACT
  TTTATTTCAA TAGAGACATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45710525	mCV25138420	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss147277419	ENSMUSSNP1656352	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs32902406					SNP	A	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:115873422 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14625	CpG island 14625	963 bp proximal
Faah	fatty acid amide hydrolase	within coordinates
Rr99792	regulatory region 99792	within coordinates
Tssr38488	transcription start site region 38488	413 bp downstream
Tssr38489	transcription start site region 38489	1040 bp upstream
Tssr42842	transcription start site region 42842	1431 bp downstream
Tssr42843	transcription start site region 42843	1629 bp downstream
Tssr42844	transcription start site region 42844	1798 bp downstream
Tssr42845	transcription start site region 42845	1817 bp downstream
Tssr42846	transcription start site region 42846	1862 bp downstream
Tssr42847	transcription start site region 42847	1895 bp downstream
Tssr42848	transcription start site region 42848	1911 bp downstream
Tssr42849	transcription start site region 42849	1928 bp downstream