rs32903385 SNP Detail

Summary

• ID
  rs32903385
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117041360 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGTTCCAGG ACAGCCAGGG CTATACAGAG AAACCCTGTC
  TCGAAAAACA AAACAAAACA AAAAACCCAA ACCAAAACAA ATACTCTTTG TTAGGGCTGG
  Y
  GAGATAGGTC AGTGGTTAAG AGCGCTGACT ACTCTTCCGA AGGTCCCGAG TTCAAATCTA
  ATGAAATCTG ATGCCCTCTT CTGGAGTGTC TGAAGACAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45710738	mCV22301666	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	T
ss147286092	ENSMUSSNP5363654	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32903385					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117041360 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14654	CpG island 14654	1236 bp distal
Kif2c	kinesin family member 2C	1539 bp upstream
Rr398412	regulatory region 398412	1356 bp downstream
Tssr42965	transcription start site region 42965	1560 bp upstream
Tssr42966	transcription start site region 42966	1527 bp upstream
Tssr42967	transcription start site region 42967	1212 bp upstream