rs32903961 SNP Detail

Summary

• ID
  rs32903961
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:118734572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTC CTCCCTTGTT TCTCTCCTGT
  W
  CCTCTTATCA CTCTAGAACG GATGC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss45210459	mCV22544972	ABI	CRAMUS_MOUSE	f	SNP	A	T	A
ss147316886	ENSMUSSNP2029603	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
ss320472576	CHEV_2_118729827	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs32903961					SNP	A	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118734572 () rs orientation: forward

Symbol	Name	Function Class
Bahd1	bromo adjacent homology domain containing 1	Intron
Cpgi12098	CpG island 12098	948 bp distal
Rr563370	regulatory region 563370	325 bp distal
Rr563372	regulatory region 563372	1990 bp distal
Rr563373	regulatory region 563373	1538 bp distal
Rr563374	regulatory region 563374	1045 bp distal
Rr563375	regulatory region 563375	1360 bp proximal