rs32904158 SNP Detail

Summary

• ID
  rs32904158
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152352569 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATAGAACT GGTGATGAAG
  AAAGCAGCCT CTGATAGCGC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC
  TCTCTGGAAA AAGCAAACAT TTGTTTATAC GTTCTCCTTG AAGAATTGTT GGTGACAAAG
  AGTCATTTTC CAGCCTCAGT GAAGCTTCAA AGTCTACCTG CCAATTAAAT ATAATGAATA
  S
  CATTAAATAT AATGGGCGTG GTGTCTCATG CCTGCCATCT CAAGATGTGG GAGGCAGACA
  CAGGAAGACT GCAAGTTTGA AGCCAGCCTA GTTAACGTGT GAGGTCTTAT CTTAAAAACG
  AAGTCCCTAA GGCATGCTCC TACATTTGCA GAATGATCCA CATGGTTCAT TTACAGCTTA
  ATTCATAGAC TTTGTCTATA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45210807	mCV23534166	ABI	CRAMUS_MOUSE	f	SNP	G	G		C	C
ss147966706	ENSMUSSNP3175859	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32904158					SNP	G	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152352569 () rs orientation: forward

Symbol	Name	Function Class
Defb26	defensin beta 26	within coordinates
Tssr26832	transcription start site region 26832	1057 bp downstream
Tssr26833	transcription start site region 26833	1082 bp downstream
Tssr26834	transcription start site region 26834	1127 bp downstream
Tssr26835	transcription start site region 26835	1144 bp downstream