rs32904669 SNP Detail

Summary

• ID
  rs32904669
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129470411 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTAAGTTT GGGGGCTGGA GAAAAAAAGC CCGTTGCTGC
  TCACAGAGGA CCTGAGTTCC GTAGGCAGCA TCCACAACAG GCAGCTTACA ACAGCTTGTG
  Y
  CTCCAGCTCA GCTAATCCTT TTCTGGCCTC TCTGGTCACA CACACAATCA AAAAACACAA
  TGAATCTTCA TCTTCATTTA AATTTTTCTC ACTTTTGAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45710469	mCV24828934	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss147442870	ENSMUSSNP5216913	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32904669					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129470411 () rs orientation: forward

Symbol	Name	Function Class
Fam167b	family with sequence similarity 167, member B	197 bp downstream
Gm68905	predicted gene, 68905	1225 bp upstream
Rr367705	regulatory region 367705	1133 bp downstream
Rr600278	regulatory region 600278	1236 bp distal
Rr600279	regulatory region 600279	772 bp distal
Rr600280	regulatory region 600280	659 bp distal
Rr600281	regulatory region 600281	443 bp proximal
Rr600282	regulatory region 600282	680 bp proximal
Rr600283	regulatory region 600283	1921 bp proximal
Tssr39178	transcription start site region 39178	967 bp downstream
Tssr43528	transcription start site region 43528	1417 bp upstream
Tssr43529	transcription start site region 43529	1321 bp upstream
Tssr43530	transcription start site region 43530	1266 bp upstream
Tssr43531	transcription start site region 43531	1217 bp upstream
Tssr43532	transcription start site region 43532	1894 bp downstream
Tssr43533	transcription start site region 43533	1903 bp downstream
Tssr43534	transcription start site region 43534	1917 bp downstream