CCTCC TGAGTGCTAG GATAAGGAGC R TGAGCAAAGC TACCTTAGAA ACTCT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46209596 | mCV27579077 | ABI | CRAMUS_MOUSE | f | SNP | G | G | A | A | G | ||
ss145123138 | ENSMUSSNP1012345 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | A | G | ||||
ss322699457 | CHEV_8_72803022 | CHEVERUD | SCREENING_POP | f | SNP | G | G | |||||
SNP Consensus Information | ||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
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rs32912832 | SNP | G | G | A | A | G | G | G |
Location: Chr8:70731773 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi20447 | CpG island 20447 | 605 bp distal | ||||||
Gm38427 | predicted gene, 38427 | within coordinates | ||||||
Rr177423 | regulatory region 177423 | 1028 bp proximal | ||||||
Rr186738 | regulatory region 186738 | 372 bp distal | ||||||
Tssr2595 | transcription start site region 2595 | 1037 bp downstream | ||||||
Tssr77724 | transcription start site region 77724 | 1010 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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