rs32914598 SNP Detail

Summary

• ID
  rs32914598
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165313370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGGCTCGC ATATGCAGTT
  CTCACCCAGG GAGCCACAAA CAAATGAGTG GTCCTTTCCT GATAATGAAG AGGGCGCCAG
  CCCAGTGCAC GCAGCCCCAC CGAGCATGTG TGATCCTCTG ACCCTGCCGT ACAGTGTCAT
  CTACACATGC CTGAGAATCT CACCACTGAC TTACCCCAAA AGTAAGATTC AAAAGTCTCA
  M
  GATGCATTAA GTTTGAGGAT TGTGCTGAGC CACACCCGCT GCTATCCCTG GGCTGCGTTG
  GGCAGGTTAC CCGGCCTCCT AGGCCTTTAC TTCCTCACGT GTCAAGTAGG AAGGCAAACA
  CAGGCACCTC CCTGGCTGAG CAGACTGCCG AAGATACTGC TGCAGAGCCT GGCCGGAGGC
  CTTTCCTTAT CAGGCAGGCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45212039	mCV23743202	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	A
ss148240382	ENSMUSSNP2852122	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32914598					SNP	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165313370 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12708	CpG island 12708	1358 bp proximal
Rr569924	regulatory region 569924	1158 bp distal
Rr569925	regulatory region 569925	983 bp distal
Rr569926	regulatory region 569926	572 bp proximal
Rr569927	regulatory region 569927	1650 bp proximal
Rr569928	regulatory region 569928	1770 bp proximal
Slc13a3	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3	Intron
Tssr27627	transcription start site region 27627	1737 bp downstream