rs32918220 SNP Detail

Summary

• ID
  rs32918220
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:180846057 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTAGCTCCC AGGGAGGTGA GGGGAAGGGT GATGGATATG
  GGAAGAGGAG AGGGATAAGG ATTGCTAATG GTAGAGGCCA GCCTCTACAG TTGCCTTCCC
  R
  GTTCGCTCAG GGTCCTCAAG TCTCGAGCCT CTAGGCTCAA GCTATGTCCT GGACAGCCAC
  GTGTCCCTAA ATGAGACCCG TGGGCAGCTC TATTGATGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45212545	mCV22913137	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss148398674	ENSMUSSNP2394295	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32918220					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:180846057 () rs orientation: forward

Symbol	Name	Function Class
Gm74821	predicted gene, 74821	within coordinates
Ptk6	PTK6 protein tyrosine kinase 6	649 bp upstream
Rr572948	regulatory region 572948	985 bp distal
Srms	src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites	1299 bp downstream
Tssr28184	transcription start site region 28184	1730 bp upstream
Tssr28185	transcription start site region 28185	1701 bp upstream