rs32918709 SNP Detail

Summary

• ID
  rs32918709
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:105116182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGTG GCCCAGCTTT AGTGCCACTA
  Y
  CTCCCCTGCT GCCTTCCATT CTTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45712710	mCV23486555	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss147157379	ENSMUSSNP6482598	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss321243328	CHEV_4_104931590	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32918709					SNP	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:105116182 () rs orientation: forward

Symbol	Name	Function Class
Rr596569	regulatory region 596569	1870 bp distal
Rr596570	regulatory region 596570	561 bp distal
Rr596571	regulatory region 596571	1504 bp proximal
Rr596572	regulatory region 596572	1920 bp proximal
Tssr38159	transcription start site region 38159	1878 bp downstream
Tssr38160	transcription start site region 38160	426 bp downstream
Tssr38161	transcription start site region 38161	363 bp downstream