rs32922080 SNP Detail

Summary

• ID
  rs32922080
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152650889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTCAAAAT AATGATTCTG
  AGACTTGCTA TTTCATGAAG AAACGCTTAG GCCAATAGCT TAGGCTTGTT CCCTGGCTGA
  GTTGTAACTT ACTTATCCAT TCATTCTAAT CTACGTCCCA CCATGTGGCT GGTTACCTCT
  CCTCAGCTTC ATATGACCGT CTATCTCCAT CAGTATTTGG GGAGAATCTC CCCACTTATT
  Y
  TATTCTGAGG GCCAAATGAC TGGTTACCTT CTTCTCAGTT TACTCATCCC TGACTCTTTC
  CCAGAATTCT TCTTTCTCTC TGCTGGTACT CCCACCTCCT ATTTCCTGCC TCAGCTCATT
  GGTCACAGGC GATTTTTTAC TGACAGGTAA TGCTTCCATA CAGTTCCCAA TAGATTCTCT
  CTACAACAAT CTTCCTTCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45212937	mCV27575696	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	C
ss147974820	ENSMUSSNP2395498	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32922080					SNP	C	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152650889 () rs orientation: forward

Symbol	Name	Function Class
A630035D09Rik	RIKEN cDNA A630035D09 gene	within coordinates
Bcl2l1	BCL2-like 1	within coordinates
Rr374093	regulatory region 374093	within coordinates
Rr567478	regulatory region 567478	228 bp distal
Rr567479	regulatory region 567479	1182 bp proximal
Tssr20835	transcription start site region 20835	1499 bp upstream