rs32922492 SNP Detail

Summary

• ID
  rs32922492
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148889176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCTG CCACCCAACT CCGGCTGTAC
  S
  GGAGGTAGGG GGCACAGAGG GCTGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45713802	mCV24952151	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C
ss148019825	ENSMUSSNP3653042	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C		G
ss321423038	CHEV_4_148178828	CHEVERUD	SCREENING_POP	f	SNP					C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32922492					SNP	C	C	G	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148889176 () rs orientation: forward

Symbol	Name	Function Class
Casz1	castor zinc finger 1	within coordinates
Cpgi15311	CpG island 15311	within coordinates
Rr100549	regulatory region 100549	within coordinates
Rr407230	regulatory region 407230	within coordinates
Tssr1379	transcription start site region 1379	378 bp downstream
Tssr40301	transcription start site region 40301	346 bp downstream
Tssr40302	transcription start site region 40302	280 bp downstream
Tssr40303	transcription start site region 40303	225 bp downstream