rs32922984 SNP Detail

Summary

• ID
  rs32922984
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156262306 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCATAGAC GCCCTACCTT
  CTATGGATAC TATTCTAGGT TCACTGTTTT CGTTACTTTG TCCTTTTCCT ATGCTTAGCT
  TTACGTGTGT GTTCAAAGCA GTACCTTCCG GCAGGAGCCT GTAAGGTCCA GGGCGGATAT
  AATCATAATT CAGAGAAACG CTTGACTTTG GGCATGCTTG GGCCTGTGGG TCCCCAGGGT
  S
  TTGGGACCAG GGGCTCGGCC CTTGCTTCCA AAGAGTGCCA AAGGACTGCC ACCTCAGACT
  GGTTGGAAAG AGCTGCGTGG TCCTCCACAG CTCCGCAGCT TAGGCCGCCC GAACAATAGG
  AGGGAGGCTG AAGGGTAGTG GGCGTCGGCC AGGTCCCTGC TGGAGGGAGT GGAGGCCAGT
  GGTGCTGCTG GTCCCCCAGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45213397	mCV23687267	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C	C
ss148072146	ENSMUSSNP114975	ENSEMBL	ENSEMBL_Sanger	f	SNP			C		C		C
ss320579292	CHEV_2_156246122	CHEVERUD	SCREENING_POP	f	SNP						C		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32922984					SNP	G	G	C	C	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156262306 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12548	CpG island 12548	within coordinates
Epb41l1	erythrocyte membrane protein band 4.1 like 1	523 bp upstream
Rr55936	regulatory region 55936	within coordinates
Tssr21155	transcription start site region 21155	1678 bp downstream
Tssr21156	transcription start site region 21156	334 bp upstream
Tssr21157	transcription start site region 21157	451 bp upstream
Tssr21158	transcription start site region 21158	652 bp upstream
Tssr21159	transcription start site region 21159	666 bp upstream
Tssr21160	transcription start site region 21160	689 bp upstream
Tssr21161	transcription start site region 21161	697 bp upstream
Tssr21162	transcription start site region 21162	730 bp upstream
Tssr21163	transcription start site region 21163	743 bp upstream
Tssr21164	transcription start site region 21164	776 bp upstream