CCTCTCCTCA AGTAGCCCCT TGGGAGGTAA CAGTGGCTTT CTCGTCCTTG CTGGCATGGT CCTTGATGAG GTAGCTGCTT GCTGCTCCCA ACCCACCCCA TCCTTGCACT ACTAGCTCAG TTCAGAGTTA AAACCAGACT CTCAGAATCC CACTCCTCAA ACTAGCCACT GTCTCTGCCC CTCCACGTCC TCTTCAGACC K GTGCCTCTCT GTTGACACCA GTCTGCTGGA GAGTACACAA AATCAGGGGC TTGGGTTTAT TTTGCTTATT TATATTTTCT TTTGTCTTTT TTGGCTGTGT TAGGGGGGTG GGACCAGAGA TAGGCATTCT GAGCCACACC TTCAGTCCCT GTGCAATTTA GTTATAAACA GAGTCTCTCT ATATAGCCCT GGCTGTCCTG K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
---|---|---|---|---|---|---|---|---|---|
ss46210165 | mCV23198209 | ABI | CRAMUS_MOUSE | f | SNP | T | T | T | G |
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
||||
rs32923936 | SNP | T | T | T | G |
Location: Chr8:23631911 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Ank1 | ankyrin 1, erythroid | within coordinates | ||||||
D8Rck1 | DNA segment, Chr 8, Rockefeller University 1 | 325 bp distal | ||||||
Gm15816 | predicted gene 15816 | within coordinates | ||||||
Mir486 | microRNA 486 | 660 bp upstream | ||||||
Mir3107 | microRNA 3107 | 678 bp downstream | ||||||
Rr186384 | regulatory region 186384 | 1510 bp distal | ||||||
Rr186385 | regulatory region 186385 | 1089 bp proximal | ||||||
Tssr76619 | transcription start site region 76619 | 1854 bp downstream | ||||||
Tssr76620 | transcription start site region 76620 | 1768 bp downstream | ||||||
Tssr76621 | transcription start site region 76621 | 1727 bp downstream | ||||||
Tssr76622 | transcription start site region 76622 | 1084 bp upstream | ||||||
Tssr76623 | transcription start site region 76623 | 1195 bp upstream | ||||||
Tssr76624 | transcription start site region 76624 | 1353 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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