rs32924385 SNP Detail

Summary

• ID
  rs32924385
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:71150966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAG GAGGTCAGCT TTTAGGGCGT
  Y
  CGACTCCACC CTGTGAAACT GACAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46210537	mCV22788494	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
ss145129773	ENSMUSSNP1832271	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss322701106	CHEV_8_73222215	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32924385					SNP	C	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:71150966 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20486	CpG island 20486	1305 bp distal
Gm11175	predicted gene 11175	845 bp downstream
Gm64347	predicted gene, 64347	within coordinates
Gm64349	predicted gene, 64349	177 bp upstream
Jund	jun D proto-oncogene	633 bp upstream
Rr368549	regulatory region 368549	within coordinates
Rr368550	regulatory region 368550	343 bp upstream
Rr664888	regulatory region 664888	1314 bp distal
Rr664889	regulatory region 664889	within coordinates
Rr664890	regulatory region 664890	188 bp proximal
Rr664891	regulatory region 664891	342 bp proximal
Rr664892	regulatory region 664892	487 bp proximal
Rr664893	regulatory region 664893	1362 bp proximal
Tssr77799	transcription start site region 77799	210 bp upstream
Tssr77800	transcription start site region 77800	615 bp upstream
Tssr81647	transcription start site region 81647	1 bp downstream
Tssr81648	transcription start site region 81648	18 bp downstream