rs32925095 SNP Detail

Summary

• ID
  rs32925095
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34420623 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGACTCGCA CAGCCGGCAC CAGACTGTTC TGGAATCGGG
  TCTGTTTACA TCACTCTACG GGGAGCCCCT TCCTGGAATA CAGGACTACG TCCTGTTTAT
  Y
  TCTGCCATAA CTTAAGTAGG CTACCTGGAG CGTAGTCCCG GAGCGTAGTA GGCCCTCCAT
  ATGTACTTGT TGACTAAATA TCCCTCACTG CCCCTCAAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46210735	mCV25375638	ABI	CRAMUS_MOUSE	f	SNP	T		T	C	T
ss149088263	ENSMUSSNP4858648	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss322573976	CHEV_8_35041067	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32925095					SNP	T	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34420623 () rs orientation: forward

Symbol	Name	Function Class
9530006C21Rik	RIKEN cDNA 9530006C21 gene	1826 bp upstream
Cpgi20240	CpG island 20240	within coordinates
Gm64370	predicted gene, 64370	746 bp upstream
Rbpms	RNA binding protein gene with multiple splicing	732 bp upstream
Rr661902	regulatory region 661902	801 bp distal
Rr661903	regulatory region 661903	242 bp distal
Rr661904	regulatory region 661904	256 bp proximal
Rr661905	regulatory region 661905	1155 bp proximal
Rr661906	regulatory region 661906	1233 bp proximal
Rr661907	regulatory region 661907	1560 bp proximal
Tssr80881	transcription start site region 80881	779 bp upstream
Tssr80882	transcription start site region 80882	618 bp upstream
Tssr80883	transcription start site region 80883	586 bp upstream