rs32926825 SNP Detail

Summary

• ID
  rs32926825
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:53745144 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCTGTGCA GACCCACACA
  TATTTAAAAA AAAAAGAAAG AAAAGATAAC TTGATCTTTA AAAGAAAAAA AAGTTACTCT
  AAAAAGAATA AACCTGGCTC CCGTTCTACC TCTAGTTTTC TATCTTCCAG TCTACGTGAC
  CTATCCGTGT GCACATACTT CTATTATTGT GACACCATCT GTTAAGGAGG ACTTGCGACA
  R
  CCAAACAGAT GTTAGTATCA TTTGCTCCGG CACCCTCCAA AGCTGGGAGC AATATTAGCT
  TCCTTTCCTT ACATATTATG GATTAGAAAA TAGACTAATA GATCTGACTA GCATGATTTT
  TCTTGCCGGT GCAATCCTGA ATGTGTGATA TATATATATA TATATATATA TATATATATA
  TATATATATA TAAAAGCAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss47732401	NES10243926	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs32926825					SNP	A	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47732401	NES10243926	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:53745144 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15869	CpG island 15869	734 bp proximal
Rbpj	recombination signal binding protein for immunoglobulin kappa J region	within coordinates
Rr367840	regulatory region 367840	1175 bp upstream
Tssr46224	transcription start site region 46224	950 bp upstream
Tssr46225	transcription start site region 46225	1158 bp upstream
Tssr46226	transcription start site region 46226	1627 bp upstream
Tssr51023	transcription start site region 51023	1452 bp downstream