rs32930185 SNP Detail

Summary

• ID
  rs32930185
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156039991 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATAT TTATTTGGCC TGTGCAAATT
  S
  CAGGAAGTTA TCCCTCTGCT TCCAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss45213764	mCV23684530	ABI	CRAMUS_MOUSE	f	SNP	G	C
ss148068268	ENSMUSSNP3629448	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
ss320578154	CHEV_2_156023807	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs32930185					SNP	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156039991 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12545	CpG island 12545	774 bp distal
Gm75148	predicted gene, 75148	1354 bp upstream
Phf20	PHD finger protein 20	within coordinates
Rr374122	regulatory region 374122	1238 bp upstream
Rr397432	regulatory region 397432	1312 bp downstream
Rr568209	regulatory region 568209	1419 bp distal
Rr568210	regulatory region 568210	878 bp distal
Rr568211	regulatory region 568211	1036 bp proximal
Rr568212	regulatory region 568212	1851 bp proximal
Tssr21145	transcription start site region 21145	1296 bp downstream
Tssr27045	transcription start site region 27045	1510 bp upstream