rs32930479 SNP Detail

Summary

• ID
  rs32930479
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:40081773 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGAT GCAAAAGTCA TAGATAGAAA
  Y
  GCATGCTCCA TTACCAAGGA GTTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46211852	mCV25306831	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss144620654	ENSMUSSNP1440028	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss322624618	CHEV_8_40714086	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32930479					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:40081773 () rs orientation: forward

Symbol	Name	Function Class
Msr1	macrophage scavenger receptor 1	within coordinates
Tssr81026	transcription start site region 81026	513 bp downstream
Tssr81027	transcription start site region 81027	616 bp downstream
Tssr81028	transcription start site region 81028	666 bp downstream
Tssr81029	transcription start site region 81029	785 bp downstream
Tssr81030	transcription start site region 81030	907 bp downstream
Tssr81031	transcription start site region 81031	1601 bp downstream