rs32932898 SNP Detail

Summary

• ID
  rs32932898
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:74316413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCCAGAGG CGGAGCCAAG
  ACTGAGGTCC TTCAGCTTGG ACTCCTCCAT CCCTTCAGGA GTCCAGGCCA GGCCAGAGTC
  TGAGCAGGCA AGCCTGGTTC CTGCTGTCTC CACCATAGAA GGCAGCACCA TGCGCTCACT
  GACCAGGACA CCAGGCATGG CCCGAAGACC TGCAAGAGTG GCTGATGTGA CTCTTTGATC
  Y
  GCAGAGGAAG AGCTAGCAAG CACCACCTGC TCCTAACAGC CATGTGAGTA GCTACACATC
  ACCCCTCCAG GTCTGACCCT GAGGTCGACA CTGCACTGGC TCAAGCCATT CAGGAGACAT
  GGTCCACACC CCACCAGGAC ATTACCCCTG GATAATCTCT ACCTTTCTTG CTATTCTGAG
  GGAGGCTGGT GCGGGTCCGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49421014	NES12784341	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32932898					SNP	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49421014	NES12784341	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:74316413 () rs orientation: forward

Symbol	Name	Function Class
Gpbar1	G protein-coupled bile acid receptor 1	1296 bp upstream
Rr17376	regulatory region 17376	1988 bp proximal
Tssr7370	transcription start site region 7370	134 bp downstream