rs32932902 SNP Detail

Summary

• ID
  rs32932902
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:74316249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGTAAGGA AACACCACCC AGGTTTCATG
  ATGTAGCCGA CTGCTAGGGA AGGGTTCACT TACACAGGAG GGGGAGCCCT CCCAGTAAAA
  GCAGTCAGGA TGTGCCACGT CCCACCCCCA GAGGCGGAGC CAAGACTGAG GTCCTTCAGC
  Y
  TGGACTCCTC CATCCCTTCA GGAGTCCAGG CCAGGCCAGA GTCTGAGCAG GCAAGCCTGG
  TTCCTGCTGT CTCCACCATA GAAGGCAGCA CCATGCGCTC ACTGACCAGG ACACCAGGCA
  TGGCCCGAAG ACCTGCAAGA GTGGCTGATG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss49421018	NES12784339	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	T	T		C	C	T		T
ss319794403	CHEV_1_74323664	CHEVERUD	SCREENING_POP	f	SNP									T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs32932902					SNP	T	T	T	T	C	T	T	T	T	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49421018	NES12784339	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:74316249 () rs orientation: forward

Symbol	Name	Function Class
Gpbar1	G protein-coupled bile acid receptor 1	1460 bp upstream
Tssr7370	transcription start site region 7370	14 bp upstream