rs32933654 SNP Detail

Summary

• ID
  rs32933654
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:74315827 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCTAACAT CCATGAACTC
  ATGAGTTCTG TAACCTGCCT GTCATGTGGT GGAGTGTAGG AGAACCATCA GACTCTGTGA
  CATATAACTT GGGAGGTGGA GGGAAAAGGA TCAAGTTCAA GGTGACACTC CACTCCACAG
  GAGTTTGAGG CCAGCCTAGG CAATATGAGA GAGACCCTGT CTCACAAGAA AAGTTGAGAG
  R
  TATGAGGATG ACTGCAGACC CGGGAAGACA AGGCTGGATC AGGCGCCCAG CCCCACCTCC
  ATCTTACATC GTGCATGATC CTTTGGTGTG TCAGCAGAAG TATCTGGCTG GTTACGGGCT
  GCTGCCTGGC ACATTCAGAG ATTAAGATAC CTAAAAATGG CTCTGTTAGT GTGTGTGTGT
  GTGGGGGGGG AGTGTTGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49421020	NES12784338	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32933654					SNP	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49421020	NES12784338	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:74315827 () rs orientation: forward

Symbol	Name	Function Class
Gpbar1	G protein-coupled bile acid receptor 1	1882 bp upstream
Rr17375	regulatory region 17375	1627 bp distal
Tssr7370	transcription start site region 7370	436 bp upstream